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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015812084.1_cds_XP_016496986.1_11156
CDS Infomation

[gene=LOC107815856] [db_xref=GeneID:107815856] [protein=probable monogalactosyldiacylglycerol synthase, chloroplastic isoform X1] [protein_id=XP_016496986.1] [location=complement(join(20649..20882,21705..21779,21905..21967,22624..22848,22999..23140,23222..23383,27439..27611,28104..28637))] [gbkey=CDS]
Sequence

ATGATGCAGCATTCTTCTTCTGTAACTCAAGAACCCACTAACCCCTTTACTTTTGTATCT
CAAGTAGGCTCTTTTGTGTTTAATAACTCATGTAGTAGAGTCAGCAAAAGTAGTTTTACT
TTAGATTCATATTCAAATTTGCTGTCTAATTACTTGTATTTTGATTGTAATGTAAAAAAA
GATTCTTTGAATCACAAGAATAAGCCAAAGGCTTCACCTATATTGAGTTTGAGTATTAGT
AATAAGAGTGCTTCATCATTTAGTAGAGTTCTTTTTCAGTTTAATAAGGCTATTAGGTTT
CATTGTGAGAAAATCCCACTCGGGTTTGCCTCGGTTGGGGTGAATTATGGAGAGAGTAAT
GGGGTTAGAGAAGAGGGGAGTGTAGTAGAGAATGAGGGAATACCTAGCAATGGTGTCGAA
TCGGAACCTCCGAAAAAGGTGCTTATTCTGATGAGTGATACTGGTGGGGGTCACAGAGCC
TCTGCTGAAGCTATTAGGTCTGCTTTCAATGAAGAATTTGGAGATAAATATCAGGTGTTC
ATTACTGATTTGTGGACAGAACATACACCGTGGCCTTTCAACCAACTGCCACGGAGTTAC
AACTTCTTAGTGAAACATGGCTCTCTGTGGAGAATGACATATTATGCTACTGCTCCTCGT
TTAGTTCATCAGACAAATTTTGCTGCTACATCTACTTTTATTGCTCGCGAGGTTGCTAAA
GGTTTAATGAAATATCAACCTGATATTATTATCAGTGTACATCCTCTAATGCAGCATGTA
CCTCTTCGCATCTTGAGGTCCAAGGGTCTCTTGAAGAAGATCATATTTACAACTGTTATA
ACAGATTTAAGCACTTGTCATCCTACGTGGTTTCACAAACTCGTTACTAGGTGCTACTGT
CCATCAGAAGAGGTAGCAAAACGAGCACTGAGAGCAGGTCTCAAGCCATATCAACTAAAA
GTTTACGGGCTTCCCGTACGGCCATCATTTGTGAAGCCGGTTCCTCCCAAGGTTGAACTG
AGAAAGGAACTTGGAATGGAGGAGCATCTCCCAGCAGTACTGTTGATGGGTGGCGGGGAA
GGGATGGGCCCAATAGAGGCAACTGCTCGAGCACTTGGAGATGCACTGTATGATGAAATT
CATGGGGAGCCAATAGGTCAACTCCTAGTAATATGCGGCCGCAATAAGAAGCTTTTCAAC
AGATTGACTTCAGTGCAGTGGAAAATTCCTGTTCAGGTAAAGGGATTTGTCACTAAAATG
GAGGAATGTATGGGCGCTTGTGATTGCATAATTACTAAGGCTGGTCCGGGGACTATTGCA
GAACCCGTGATTCGAGGACTGCCTATAATTCTTAATGATTACATTGCTGGACAGGAAGCT
GGAAATGTGCCATATGTTATCGAGAACGGATGTGGGAAATTCTCAAAGTCGCCTAAAAAG
ATAGCCAATATAGTAGCTCAGTGGTTTGGTCCAAGACAAGATGAACTCAGAATCATGTCT
CAAAATGCTCTAAGATTAGCAAGGCCGGATGCTGTATTTAAGATAGTCCATGACATGCAT
GAATTGGTCAGGCAAAGAAATTTTGAGCCCCAATGTTGTCCTGCTTAA

Peptide Sequence

PEP ID

XP_016496986.1
PEP Infomation

PREDICTED: probable monogalactosyldiacylglycerol synthase, chloroplastic isoform X1 [Nicotiana tabacum]
Sequence

MMQHSSSVTQEPTNPFTFVSQVGSFVFNNSCSRVSKSSFTLDSYSNLLSNYLYFDCNVKK
DSLNHKNKPKASPILSLSISNKSASSFSRVLFQFNKAIRFHCEKIPLGFASVGVNYGESN
GVREEGSVVENEGIPSNGVESEPPKKVLILMSDTGGGHRASAEAIRSAFNEEFGDKYQVF
ITDLWTEHTPWPFNQLPRSYNFLVKHGSLWRMTYYATAPRLVHQTNFAATSTFIAREVAK
GLMKYQPDIIISVHPLMQHVPLRILRSKGLLKKIIFTTVITDLSTCHPTWFHKLVTRCYC
PSEEVAKRALRAGLKPYQLKVYGLPVRPSFVKPVPPKVELRKELGMEEHLPAVLLMGGGE
GMGPIEATARALGDALYDEIHGEPIGQLLVICGRNKKLFNRLTSVQWKIPVQVKGFVTKM
EECMGACDCIITKAGPGTIAEPVIRGLPIILNDYIAGQEAGNVPYVIENGCGKFSKSPKK
IANIVAQWFGPRQDELRIMSQNALRLARPDAVFKIVHDMHELVRQRNFEPQCCPA

Transcript Sequence

Gene sequence data has not been registered.